STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG84154.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
OJG84155.1
Hypothetical protein.
 
     0.946
OJG84156.1
Carboxymuconolactone decarboxylase.
 
    0.807
OJG84153.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
 
   
 0.788
OJG86426.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.769
OJG84060.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.769
OJG85429.1
CoA disulfide reductase.
    
  0.567
OJG84724.1
Pyridine nucleotide-disulfide oxidoreductase.
    
  0.567
OJG89526.1
Cysteine synthase A.
   
 
  0.559
OJG86371.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
  0.559
OJG89039.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
 
   
 0.552
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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