STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG84100.1Thiol reductant ABC exporter, CydD subunit. (570 aa)    
Predicted Functional Partners:
OJG84101.1
Cytochrome d ubiquinol oxidase, subunit II.
 
  
 0.987
OJG84102.1
Cytochrome d ubiquinol oxidase, subunit I.
 
  
 0.984
OJG87604.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
   
 0.787
OJG85421.1
Hypothetical protein.
 
   
 0.770
OJG87605.1
Pyridine nucleotide-disulfide family oxidoreductase.
 
   
 0.765
OJG87603.1
Hypothetical protein; Belongs to the FPP/GGPP synthase family.
  
     0.739
OJG88706.1
Hypothetical protein.
 
   
 0.718
OJG88714.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
     0.708
OJG88707.1
Hypothetical protein.
 
   
 0.707
OJG89494.1
Hypothetical protein.
 
  
  0.617
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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