STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG84079.1Urea carboxylase-associated protein 1. (220 aa)    
Predicted Functional Partners:
OJG84077.1
Urea carboxylase.
 
   
 0.971
OJG84076.1
Allophanate hydrolase.
 
  
 0.949
OJG84081.1
Hypothetical protein.
 
   
 0.923
OJG84082.1
Aliphatic sulfonates family ABC transporter, substrate-binding protein.
 
   
 0.920
OJG86617.1
Hypothetical protein.
    
  0.902
OJG84080.1
Hypothetical protein.
 
   
 0.881
OJG84078.1
Urea carboxylase-associated protein 2.
 
   
0.693
OJG84083.1
Hypothetical protein; Belongs to the P(II) protein family.
       0.588
glsA
Glutaminase A; Belongs to the glutaminase family.
    
  0.581
OJG84084.1
Hypothetical protein.
       0.578
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.