Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG80091.1 | OJG83818.1 | RV13_GL003273 | RV13_GL002579 | Peptidase M13. | Hypothetical protein. | 0.660 |
OJG80091.1 | pepT | RV13_GL003273 | RV13_GL000347 | Peptidase M13. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.455 |
OJG83817.1 | OJG83818.1 | RV13_GL002578 | RV13_GL002579 | Hypothetical protein. | Hypothetical protein. | 0.546 |
OJG83818.1 | OJG80091.1 | RV13_GL002579 | RV13_GL003273 | Hypothetical protein. | Peptidase M13. | 0.660 |
OJG83818.1 | OJG83817.1 | RV13_GL002579 | RV13_GL002578 | Hypothetical protein. | Hypothetical protein. | 0.546 |
OJG83818.1 | OJG83819.1 | RV13_GL002579 | RV13_GL002580 | Hypothetical protein. | Hypothetical protein. | 0.574 |
OJG83818.1 | OJG84052.1 | RV13_GL002579 | RV13_GL002514 | Hypothetical protein. | ComE operon protein 2. | 0.592 |
OJG83818.1 | OJG86166.1 | RV13_GL002579 | RV13_GL000644 | Hypothetical protein. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.532 |
OJG83818.1 | OJG88729.1 | RV13_GL002579 | RV13_GL002139 | Hypothetical protein. | FAD dependent oxidoreductase. | 0.569 |
OJG83818.1 | aroQ | RV13_GL002579 | RV13_GL001357 | Hypothetical protein. | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.584 |
OJG83818.1 | guaB | RV13_GL002579 | RV13_GL002774 | Hypothetical protein. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.790 |
OJG83818.1 | guaC | RV13_GL002579 | RV13_GL000321 | Hypothetical protein. | GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily. | 0.569 |
OJG83818.1 | pepT | RV13_GL002579 | RV13_GL000347 | Hypothetical protein. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.726 |
OJG83819.1 | OJG83818.1 | RV13_GL002580 | RV13_GL002579 | Hypothetical protein. | Hypothetical protein. | 0.574 |
OJG84052.1 | OJG83818.1 | RV13_GL002514 | RV13_GL002579 | ComE operon protein 2. | Hypothetical protein. | 0.592 |
OJG86166.1 | OJG83818.1 | RV13_GL000644 | RV13_GL002579 | Cyclopropane-fatty-acyl-phospholipid synthase. | Hypothetical protein. | 0.532 |
OJG86166.1 | OJG88729.1 | RV13_GL000644 | RV13_GL002139 | Cyclopropane-fatty-acyl-phospholipid synthase. | FAD dependent oxidoreductase. | 0.642 |
OJG88729.1 | OJG83818.1 | RV13_GL002139 | RV13_GL002579 | FAD dependent oxidoreductase. | Hypothetical protein. | 0.569 |
OJG88729.1 | OJG86166.1 | RV13_GL002139 | RV13_GL000644 | FAD dependent oxidoreductase. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.642 |
aroQ | OJG83818.1 | RV13_GL001357 | RV13_GL002579 | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | Hypothetical protein. | 0.584 |
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