Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG80083.1 | OJG80086.1 | RV13_GL003265 | RV13_GL003268 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.825 |
OJG80083.1 | OJG83405.1 | RV13_GL003265 | RV13_GL002785 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.680 |
OJG80083.1 | aroE | RV13_GL003265 | RV13_GL002786 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.564 |
OJG80083.1 | aroE-2 | RV13_GL003265 | RV13_GL003267 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.690 |
OJG80083.1 | aroE-3 | RV13_GL003265 | RV13_GL003490 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.444 |
OJG80086.1 | OJG80083.1 | RV13_GL003268 | RV13_GL003265 | Hypothetical protein. | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | 0.825 |
OJG80086.1 | OJG83404.1 | RV13_GL003268 | RV13_GL002784 | Hypothetical protein. | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | 0.742 |
OJG80086.1 | OJG83405.1 | RV13_GL003268 | RV13_GL002785 | Hypothetical protein. | Hypothetical protein. | 0.576 |
OJG80086.1 | OJG84228.1 | RV13_GL003268 | RV13_GL002360 | Hypothetical protein. | 3-dehydroquinate dehydratase, type I. | 0.707 |
OJG80086.1 | OJG87657.1 | RV13_GL003268 | RV13_GL003463 | Hypothetical protein. | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | 0.658 |
OJG80086.1 | aroD | RV13_GL003268 | RV13_GL002787 | Hypothetical protein. | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.745 |
OJG80086.1 | aroE | RV13_GL003268 | RV13_GL002786 | Hypothetical protein. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.795 |
OJG80086.1 | aroE-2 | RV13_GL003268 | RV13_GL003267 | Hypothetical protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.907 |
OJG80086.1 | aroE-3 | RV13_GL003268 | RV13_GL003490 | Hypothetical protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.729 |
OJG83404.1 | OJG80086.1 | RV13_GL002784 | RV13_GL003268 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.742 |
OJG83404.1 | OJG83405.1 | RV13_GL002784 | RV13_GL002785 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.850 |
OJG83404.1 | aroD | RV13_GL002784 | RV13_GL002787 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.549 |
OJG83404.1 | aroE | RV13_GL002784 | RV13_GL002786 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.739 |
OJG83404.1 | aroE-2 | RV13_GL002784 | RV13_GL003267 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.520 |
OJG83404.1 | aroE-3 | RV13_GL002784 | RV13_GL003490 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.497 |
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