STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG81765.1DNA-binding response regulator. (228 aa)    
Predicted Functional Partners:
OJG81766.1
Two-component system sensor histidine kinase.
 
 0.984
OJG85718.1
Hypothetical protein.
 
 0.930
OJG85145.1
Hypothetical protein.
 0.930
OJG84374.1
Hypothetical protein.
 
 0.930
OJG85597.1
Hypothetical protein.
 0.921
OJG88778.1
Hypothetical protein.
 
 0.919
OJG81410.1
Hypothetical protein.
 
 0.918
OJG89123.1
Hypothetical protein.
 
 0.915
OJG88695.1
Hypothetical protein.
 
 0.914
OJG83392.1
Histidine kinase.
 0.911
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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