STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG81417.1DrrB family ABC transporter efflux protein. (363 aa)    
Predicted Functional Partners:
OJG81416.1
Hypothetical protein.
 
 0.990
OJG87115.1
Hypothetical protein.
 
 
 0.789
OJG86090.1
Hypothetical protein.
 
 0.696
OJG85965.1
Hypothetical protein.
 
 0.696
OJG82925.1
Hypothetical protein.
 
 0.676
OJG86347.1
Hypothetical protein.
 
 0.673
OJG86639.1
Teichoic acid ABC transporter permease.
    
  0.672
OJG84709.1
ABC transporter ATP-binding protein.
 
 
 0.631
OJG86074.1
Hypothetical protein.
  
 
 0.627
OJG85153.1
Hypothetical protein.
  
 
 0.627
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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