STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG77973.1Conjugal transfer protein. (90 aa)    
Predicted Functional Partners:
OJG77974.1
Antirestriction protein ArdA.
 
  
 0.954
OJG77972.1
Cro/Cl family transcriptional regulator.
 
    0.904
OJG89551.1
Transcriptional regulator.
 
  
 0.852
OJG77864.1
Cro/CI family transcriptional regulator.
 
  
 0.851
OJG89555.1
Antirestriction protein.
 
  
 0.827
OJG77867.1
Hypothetical protein.
 
  
 0.823
OJG77034.1
Hypothetical protein.
 
  
 0.822
OJG89557.1
Conjugative transposon-like protein.
 
    0.813
OJG77978.1
Membrane protein.
 
    0.812
OJG89558.1
ATP/GTP-binding protein.
 
    0.811
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.