STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG77035.1NLP/P60 family lipoprotein. (322 aa)    
Predicted Functional Partners:
OJG77034.1
Hypothetical protein.
 
    0.941
OJG77036.1
Hypothetical protein.
 
  
 0.939
OJG77871.1
Conjugative transposon ATP/GTP-binding protein.
 
  
 0.909
OJG89558.1
ATP/GTP-binding protein.
 
  
 0.908
OJG89547.1
Hypothetical protein.
 
  
 0.859
OJG89559.1
Hypothetical protein.
 
  
 0.822
OJG89561.1
Hypothetical protein.
 
   0.820
OJG79235.1
Conjugative transposon protein.
 
   0.819
OJG77974.1
Antirestriction protein ArdA.
 
  
 0.801
OJG89555.1
Antirestriction protein.
 
  
 0.798
Your Current Organism:
Enterococcus raffinosus
NCBI taxonomy Id: 71452
Other names: ATCC 49427, CCUG 29292, CIP 103329, DSM 5633, E. raffinosus, JCM 8733, LMG 12888, LMG:12888, NBRC 100492, NCIMB 12901, NCTC 12192
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.