STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_00033Unannotated protein. (217 aa)    
Predicted Functional Partners:
GCA_001623405_00846
Unannotated protein.
    
 0.888
GCA_001623405_02364
Unannotated protein.
  
  
  0.860
GCA_001623405_02951
Unannotated protein.
    
  0.858
GCA_001623405_01106
Unannotated protein.
 
 
 0.804
GCA_001623405_02413
Unannotated protein.
    
   0.790
GCA_001623405_00858
Unannotated protein.
    
 
 0.785
GCA_001623405_00832
Unannotated protein.
    
 
 0.644
GCA_001623405_00960
Unannotated protein.
    
   0.638
GCA_001623405_00834
Unannotated protein.
    
 
0.596
GCA_001623405_01449
Unannotated protein.
     
 0.541
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.