STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_00263Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_001623405_01225
Unannotated protein.
  
     0.659
GCA_001623405_00138
Unannotated protein.
  
     0.575
GCA_001623405_00264
Unannotated protein.
       0.567
GCA_001623405_02210
Unannotated protein.
  
     0.567
GCA_001623405_00197
Unannotated protein.
  
     0.555
GCA_001623405_01167
Unannotated protein.
 
  
 0.529
GCA_001623405_00250
Unannotated protein.
  
     0.524
GCA_001623405_00650
Unannotated protein.
 
 
  0.521
GCA_001623405_01414
Unannotated protein.
 
   
 0.514
GCA_001623405_00262
Unannotated protein.
       0.496
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.