STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_00512Unannotated protein. (71 aa)    
Predicted Functional Partners:
GCA_001623405_00511
Unannotated protein.
 
 
 0.984
GCA_001623405_02573
Unannotated protein.
 
 
 0.920
GCA_001623405_00509
Unannotated protein.
 
 
  0.902
GCA_001623405_00510
Unannotated protein.
 
 
  0.898
GCA_001623405_00507
Unannotated protein.
 
  
 0.894
GCA_001623405_00508
Unannotated protein.
 
  
 0.867
GCA_001623405_00513
Unannotated protein.
 
    0.862
GCA_001623405_00506
Unannotated protein.
 
     0.831
GCA_001623405_02574
Unannotated protein.
 
  
 0.746
GCA_001623405_02565
Unannotated protein.
    
 0.526
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.