STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_00610Unannotated protein. (435 aa)    
Predicted Functional Partners:
GCA_001623405_00609
Unannotated protein.
       0.723
GCA_001623405_00678
Unannotated protein.
   
  0.685
GCA_001623405_01377
Unannotated protein.
   
  0.685
GCA_001623405_02047
Unannotated protein.
   
  0.685
GCA_001623405_02660
Unannotated protein.
     
 0.592
GCA_001623405_02813
Unannotated protein.
     
 0.592
GCA_001623405_00039
Unannotated protein.
     
 0.552
GCA_001623405_02314
Unannotated protein.
   
 0.474
GCA_001623405_02123
Unannotated protein.
    
  0.458
GCA_001623405_00115
Unannotated protein.
   
 
 0.430
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.