STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_01487Unannotated protein. (281 aa)    
Predicted Functional Partners:
GCA_001623405_03030
Unannotated protein.
  
     0.715
GCA_001623405_01486
Unannotated protein.
  
    0.706
GCA_001623405_01255
Unannotated protein.
    
  0.652
GCA_001623405_01485
Unannotated protein.
       0.630
GCA_001623405_01488
Unannotated protein.
       0.529
GCA_001623405_01635
Unannotated protein.
     
 0.515
GCA_001623405_00301
Unannotated protein.
   
 
  0.457
GCA_001623405_01526
Unannotated protein.
   
 
  0.457
GCA_001623405_00798
Unannotated protein.
   
 
 0.455
GCA_001623405_00584
Unannotated protein.
    
  0.429
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.