STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_02248Unannotated protein. (426 aa)    
Predicted Functional Partners:
GCA_001623405_00400
Unannotated protein.
  
 0.683
GCA_001623405_02781
Unannotated protein.
 
  
  0.653
GCA_001623405_01178
Unannotated protein.
    
  0.621
GCA_001623405_02023
Unannotated protein.
    
 0.604
GCA_001623405_00906
Unannotated protein.
    
  0.601
GCA_001623405_00130
Unannotated protein.
    
  0.583
GCA_001623405_01853
Unannotated protein.
  
 
 0.562
GCA_001623405_02410
Unannotated protein.
 
 
  0.558
GCA_001623405_01187
Unannotated protein.
 
 
 
 0.555
GCA_001623405_00996
Unannotated protein.
   
 
 0.477
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.