STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_02407Unannotated protein. (411 aa)    
Predicted Functional Partners:
GCA_001623405_01106
Unannotated protein.
  
 
 0.791
GCA_001623405_01538
Unannotated protein.
  
 
 0.733
GCA_001623405_02720
Unannotated protein.
  
 
 0.686
GCA_001623405_02245
Unannotated protein.
     
 0.657
GCA_001623405_02736
Unannotated protein.
  
 
 0.657
GCA_001623405_02408
Unannotated protein.
      0.649
GCA_001623405_01032
Unannotated protein.
  
 
  0.635
GCA_001623405_00650
Unannotated protein.
    
 0.594
GCA_001623405_00339
Unannotated protein.
   
 
  0.592
GCA_001623405_01543
Unannotated protein.
   
 
  0.592
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.