STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_02543Unannotated protein. (441 aa)    
Predicted Functional Partners:
GCA_001623405_01026
Unannotated protein.
 
 
 0.974
GCA_001623405_00020
Unannotated protein.
    
 0.902
GCA_001623405_00115
Unannotated protein.
  
 0.890
GCA_001623405_00021
Unannotated protein.
  
 
 0.883
GCA_001623405_00680
Unannotated protein.
  
 0.859
GCA_001623405_00719
Unannotated protein.
 
 0.859
GCA_001623405_00845
Unannotated protein.
   
 
 0.858
GCA_001623405_00854
Unannotated protein.
   
 
 0.854
GCA_001623405_02817
Unannotated protein.
   
 
  0.847
GCA_001623405_02105
Unannotated protein.
  
 0.824
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.