STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ25320.1PFAM: Glycosyl hydrolase family 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: shg:Sph21_2656 endo-1,4-beta-xylanase; PFAM: Glycoside hydrolase, family 10; SMART: Glycoside hydrolase, family 10; SPTR: Endo-1,4-beta-xylanase. (395 aa)    
Predicted Functional Partners:
EHQ25330.1
PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain; Glycosyl hydrolase family 67 N-terminus; COGs: COG3661 Alpha-glucuronidase; InterPro IPR005154:IPR011100:IPR011099; KEGG: rmr:Rmar_1079 alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle; Glycoside hydrolase family 67; Glycosyl hydrolase 67, C-terminal; SPTR: Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.716
EHQ25961.1
Hypothetical protein; PFAM: Glycosyl hydrolase family 67 N-terminus; KEGG: pjd:Pjdr2_5977 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.711
EHQ27657.1
PFAM: Glycosyl hydrolases family 11; InterPro IPR001137; KEGG: psn:Pedsa_2554 endo-1,4-beta-xylanase; PFAM: Glycoside hydrolase, family 11; SPTR: Glycoside hydrolase family 11; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.709
EHQ25323.1
KEGG: cpi:Cpin_4845 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.702
EHQ27467.1
Hypothetical protein; PFAM: Glycosyl hydrolase family 67 N-terminus; KEGG: psn:Pedsa_2705 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.702
EHQ25331.1
PFAM: Glycosyl hydrolases family 43; InterPro IPR006710; KEGG: shg:Sph21_2658 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 43; SPTR: Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.691
EHQ27464.1
PFAM: Glycosyl hydrolases family 43; InterPro IPR006710; KEGG: sli:Slin_0353 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 43; SPTR: Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.690
EHQ28673.1
Glycoside hydrolase family 43; PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710:IPR005084:IPR006584; KEGG: cac:CA_P0115 endo-1,4-beta-xylanase; PFAM: Glycoside hydrolase, family 43; Carbohydrate binding domain, family 6; SMART: Cellulose binding, type IV; SPTR: Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.673
EHQ25307.1
PFAM: Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: alpha-N-arabinofuranosidase; PFAM: Glycoside hydrolase, family 43; SPTR: Alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.669
EHQ25306.1
PFAM: Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: sli:Slin_1420 glycoside hydrolase family 43; PFAM: Glycoside hydrolase, family 43; SPTR: Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.668
Your Current Organism:
Mucilaginibacter paludis
NCBI taxonomy Id: 714943
Other names: M. paludis DSM 18603, Mucilaginibacter paludis DSM 18603, Mucilaginibacter paludis TPT56, Mucilaginibacter paludis str. DSM 18603, Mucilaginibacter paludis strain DSM 18603
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