rppH protein (Asticcacaulis biprosthecum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Asticcacaulis biprosthecum

NCBI taxonomy Id: 715226
Other names: A. biprosthecum C19, Asticcacaulis biprosthecum C19, Asticcacaulis biprosthecum str. C19, Asticcacaulis biprosthecum strain C19

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABI_07030	rppH	ABI_07030	ABI_07020	Divergent polysaccharide deacetylase family protein; [S] COG2861 Uncharacterized protein conserved in bacteria.	RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.	0.824
ABI_19230	ABI_30100	ABI_19230	ABI_30100	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	0.999
ABI_19230	ABI_30550	ABI_19230	ABI_30550	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	mmoS; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	0.998
ABI_19230	ABI_39860	ABI_19230	ABI_39860	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	0.999
ABI_19230	ABI_40910	ABI_19230	ABI_40910	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	0.999
ABI_19230	ABI_46700	ABI_19230	ABI_46700	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	Sensory box protein; PRIAM ID: PRI004197; [T] COG2202 FOG: PAS/PAC domain.	0.999
ABI_19230	nadE	ABI_19230	ABI_06820	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	Putative glutamine-dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.	0.573
ABI_19230	ribB	ABI_19230	ABI_34840	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.	0.910
ABI_19230	rppH	ABI_19230	ABI_07020	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.	0.824
ABI_30100	ABI_19230	ABI_30100	ABI_19230	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	0.999
ABI_30100	ABI_30550	ABI_30100	ABI_30550	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	mmoS; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	0.994
ABI_30100	ABI_39860	ABI_30100	ABI_39860	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	0.996
ABI_30100	ABI_40910	ABI_30100	ABI_40910	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	0.998
ABI_30100	ABI_46700	ABI_30100	ABI_46700	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	Sensory box protein; PRIAM ID: PRI004197; [T] COG2202 FOG: PAS/PAC domain.	0.998
ABI_30100	nadE	ABI_30100	ABI_06820	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	Putative glutamine-dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.	0.579
ABI_30100	ribB	ABI_30100	ABI_34840	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.	0.919
ABI_30100	rppH	ABI_30100	ABI_07020	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.	0.804
ABI_30550	ABI_19230	ABI_30550	ABI_19230	mmoS; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.	0.998
ABI_30550	ABI_30100	ABI_30550	ABI_30100	mmoS; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	0.994
ABI_30550	ABI_39860	ABI_30550	ABI_39860	mmoS; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.	0.994

page 1 of 4

Server load: low (20%) [HD]

Share

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About