STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI_17870Amidohydrolase family protein; [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold. (276 aa)    
Predicted Functional Partners:
ABI_17850
Aldo/keto reductase family protein; PRIAM ID: PRI002737; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
  0.989
fucP
L-fucose:H+ symporter permease; [GEPR] COG0477 Permeases of the major facilitator superfamily.
 
  
 0.898
ABI_17860
iclR helix-turn-helix domain protein; [K] COG1414 Transcriptional regulator.
 
    0.871
ABI_17890
Hypothetical protein; [S] COG3254 Uncharacterized conserved protein.
 
  
 0.866
ABI_17830
D-galactarate dehydratase / Altronate hydrolase; PRIAM ID: PRI000450; [G] COG2721 Altronate dehydratase.
 
     0.670
ABI_43960
Rieske 2Fe-2S domain protein; PRIAM ID: PRI003037; [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.639
ABI_44760
Vanillate O-demethylase oxidoreductase; [C] COG0633 Ferredoxin.
     
 0.639
ABI_17820
Short chain dehydrogenase family protein; PRIAM ID: PRI000090; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
  0.633
ABI_40670
Hypothetical protein.
  
     0.584
ABI_41060
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain protein; PRIAM ID: PRI001931; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.568
Your Current Organism:
Asticcacaulis biprosthecum
NCBI taxonomy Id: 715226
Other names: A. biprosthecum C19, Asticcacaulis biprosthecum C19, Asticcacaulis biprosthecum str. C19, Asticcacaulis biprosthecum strain C19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.