STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI_38780enoyl-CoA hydratase/isomerase family protein; PRIAM ID: PRI003405; [H] COG0447 Dihydroxynaphthoic acid synthase. (342 aa)    
Predicted Functional Partners:
ABI_38770
[I] COG1960 Acyl-CoA dehydrogenases.
 
 0.994
mmsB
[G] COG0362 6-phosphogluconate dehydrogenase; Belongs to the HIBADH-related family.
 
 0.992
ABI_21380
Sensory box protein; PRIAM ID: PRI004197; [T] COG0642 Signal transduction histidine kinase.
    
 0.973
ABI_19230
Sensory box protein; PRIAM ID: PRI004197; [T] COG0784 FOG: CheY-like receiver.
    
 0.968
ABI_06130
acyl-CoA dehydrogenase, C-terminal domain protein; PRIAM ID: PRI002287; [I] COG1960 Acyl-CoA dehydrogenases.
 
 0.959
ABI_46700
Sensory box protein; PRIAM ID: PRI004197; [T] COG2202 FOG: PAS/PAC domain.
    
 0.958
ABI_19930
Sensory box protein; PRIAM ID: PRI004197; [T] COG2202 FOG: PAS/PAC domain.
    
 0.956
ABI_22510
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.
    
 0.956
ABI_24090
[I] COG1960 Acyl-CoA dehydrogenases.
 
 0.956
ABI_30100
Sensory box protein; PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase.
   
 0.956
Your Current Organism:
Asticcacaulis biprosthecum
NCBI taxonomy Id: 715226
Other names: A. biprosthecum C19, Asticcacaulis biprosthecum C19, Asticcacaulis biprosthecum str. C19, Asticcacaulis biprosthecum strain C19
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