STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI_44290Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (177 aa)    
Predicted Functional Partners:
ABI_44280
Esterase family protein; PRIAM ID: PRI001045; [R] COG0627 Predicted esterase.
 
     0.800
ABI_44330
Hypothetical protein; Chain A, Pseudomonas Mendocina Lipase.
 
     0.577
ABI_43850
NAD dependent epimerase/dehydratase family protein; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
  
   0.557
ABI_44960
[Q] COG2124 Cytochrome P450.
  
  0.555
ABI_44760
Vanillate O-demethylase oxidoreductase; [C] COG0633 Ferredoxin.
  
  
 0.544
ABI_20870
Fatty acid hydroxylase superfamily protein; [I] COG3000 Sterol desaturase.
   
 0.539
ABI_44770
Vanillate O-demethylase oxygenase subunit; [PR] COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
  
 
  0.536
pobA
4-hydroxybenzoate 3-monooxygenase; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
     0.524
ABI_43960
Rieske 2Fe-2S domain protein; PRIAM ID: PRI003037; [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
  
 0.501
ABI_44300
alpha-N-arabinofuranosidase 2; [G] COG3534 Alpha-L-arabinofuranosidase.
       0.498
Your Current Organism:
Asticcacaulis biprosthecum
NCBI taxonomy Id: 715226
Other names: A. biprosthecum C19, Asticcacaulis biprosthecum C19, Asticcacaulis biprosthecum str. C19, Asticcacaulis biprosthecum strain C19
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