Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAEL001216 | AAEL002563 | Q1HR75 | Q17HT6 | ATP-dependent RNA helicase. | AAEL002563-PA. | 0.979 |
AAEL001216 | AAEL004702 | Q1HR75 | Q0IFL9 | ATP-dependent RNA helicase. | AAEL004702-PA. | 0.968 |
AAEL001216 | AAEL006075 | Q1HR75 | Q177N0 | ATP-dependent RNA helicase. | AAEL006075-PA. | 0.960 |
AAEL001216 | AAEL011637 | Q1HR75 | Q16PI2 | ATP-dependent RNA helicase. | AAEL011637-PA. | 0.980 |
AAEL002563 | AAEL001216 | Q17HT6 | Q1HR75 | AAEL002563-PA. | ATP-dependent RNA helicase. | 0.979 |
AAEL002563 | AAEL004702 | Q17HT6 | Q0IFL9 | AAEL002563-PA. | AAEL004702-PA. | 0.960 |
AAEL002563 | AAEL006075 | Q17HT6 | Q177N0 | AAEL002563-PA. | AAEL006075-PA. | 0.999 |
AAEL002563 | AAEL011637 | Q17HT6 | Q16PI2 | AAEL002563-PA. | AAEL011637-PA. | 0.999 |
AAEL004702 | AAEL001216 | Q0IFL9 | Q1HR75 | AAEL004702-PA. | ATP-dependent RNA helicase. | 0.968 |
AAEL004702 | AAEL002563 | Q0IFL9 | Q17HT6 | AAEL004702-PA. | AAEL002563-PA. | 0.960 |
AAEL004702 | AAEL006075 | Q0IFL9 | Q177N0 | AAEL004702-PA. | AAEL006075-PA. | 0.958 |
AAEL004702 | AAEL009878 | Q0IFL9 | Q16UL0 | AAEL004702-PA. | AAEL009878-PA. | 0.969 |
AAEL004702 | AAEL011637 | Q0IFL9 | Q16PI2 | AAEL004702-PA. | AAEL011637-PA. | 0.947 |
AAEL004702 | AAEL012987 | Q0IFL9 | Q16KI3 | AAEL004702-PA. | AAEL012987-PA. | 0.994 |
AAEL004702 | MED15 | Q0IFL9 | Q17BA4 | AAEL004702-PA. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.936 |
AAEL004702 | MED23 | Q0IFL9 | Q16HH9 | AAEL004702-PA. | Mediator of RNA polymerase II transcription subunit 23; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.936 |
AAEL004702 | MED30 | Q0IFL9 | Q172Y1 | AAEL004702-PA. | Mediator of RNA polymerase II transcription subunit 30; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.936 |
AAEL004702 | MED4 | Q0IFL9 | Q177A7 | AAEL004702-PA. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.939 |
AAEL006075 | AAEL001216 | Q177N0 | Q1HR75 | AAEL006075-PA. | ATP-dependent RNA helicase. | 0.960 |
AAEL006075 | AAEL002563 | Q177N0 | Q17HT6 | AAEL006075-PA. | AAEL002563-PA. | 0.999 |
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