STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP20_CCG019117Putative v-snare. (112 aa)    
Predicted Functional Partners:
RP20_CCG003713
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.907
RP20_CCG003531
t-SNARE coiled-coil homology domain-containing protein.
    
 
0.905
RP20_CCG004569
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.863
RP20_CCG003986
t-SNARE coiled-coil homology domain-containing protein.
    
 0.822
RP20_CCG001100
PWWP domain-containing protein.
   
 
 0.692
RP20_CCG018428
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.649
RP20_CCG018184
Uncharacterized protein; Belongs to the cyclin family.
     
 0.631
RP20_CCG026882
Uncharacterized protein.
    
 0.620
RP20_CCG018719
TFIIB-type domain-containing protein.
     
 0.601
RP20_CCG002131
Transcription elongation factor SPT5.
    
 0.595
Your Current Organism:
Aedes albopictus
NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito
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