RP20_CCG019670 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG019670

Putative mitochondrion. (84 aa)

Predicted Functional Partners:

RP20_CCG000225

0.617

RP20_CCG001649

0.580

RP20_CCG024916

0.565

RP20_CCG021956

0.548

RP20_CCG024506

0.542

RP20_CCG003501

0.488

RP20_CCG005053

0.485

RP20_CCG013407

0.455

RP20_CCG022349

0.450

RP20_CCG007262

0.442

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG000225	RP20_CCG003501	A0A182G0U0	A0A023EGZ5	Uncharacterized protein.	Putative cytochrome c oxidase polypeptide.	0.591
RP20_CCG000225	RP20_CCG005053	A0A182G0U0	A0A182G895	Uncharacterized protein.	Uncharacterized protein.	0.592
RP20_CCG000225	RP20_CCG019670	A0A182G0U0	A0A023EDF8	Uncharacterized protein.	Putative mitochondrion.	0.617
RP20_CCG000225	RP20_CCG021956	A0A182G0U0	A0A023ECA7	Uncharacterized protein.	Uncharacterized protein.	0.592
RP20_CCG000225	RP20_CCG022349	A0A182G0U0	A0A182H5U9	Uncharacterized protein.	Uncharacterized protein.	0.572
RP20_CCG000225	RP20_CCG024506	A0A182G0U0	A0A023EDB5	Uncharacterized protein.	Putative cytochrome c oxidase assembly protein.	0.741
RP20_CCG000225	RP20_CCG024916	A0A182G0U0	A0A182H9U4	Uncharacterized protein.	Uncharacterized protein.	0.630
RP20_CCG001649	RP20_CCG003501	A0A182G2V4	A0A023EGZ5	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Putative cytochrome c oxidase polypeptide.	0.999
RP20_CCG001649	RP20_CCG019670	A0A182G2V4	A0A023EDF8	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Putative mitochondrion.	0.580
RP20_CCG001649	RP20_CCG021956	A0A182G2V4	A0A023ECA7	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Uncharacterized protein.	0.994
RP20_CCG001649	RP20_CCG022349	A0A182G2V4	A0A182H5U9	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Uncharacterized protein.	0.491
RP20_CCG003501	RP20_CCG000225	A0A023EGZ5	A0A182G0U0	Putative cytochrome c oxidase polypeptide.	Uncharacterized protein.	0.591
RP20_CCG003501	RP20_CCG001649	A0A023EGZ5	A0A182G2V4	Putative cytochrome c oxidase polypeptide.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.999
RP20_CCG003501	RP20_CCG005053	A0A023EGZ5	A0A182G895	Putative cytochrome c oxidase polypeptide.	Uncharacterized protein.	0.956
RP20_CCG003501	RP20_CCG019670	A0A023EGZ5	A0A023EDF8	Putative cytochrome c oxidase polypeptide.	Putative mitochondrion.	0.488
RP20_CCG003501	RP20_CCG021956	A0A023EGZ5	A0A023ECA7	Putative cytochrome c oxidase polypeptide.	Uncharacterized protein.	0.995
RP20_CCG003501	RP20_CCG022349	A0A023EGZ5	A0A182H5U9	Putative cytochrome c oxidase polypeptide.	Uncharacterized protein.	0.960
RP20_CCG003501	RP20_CCG024916	A0A023EGZ5	A0A182H9U4	Putative cytochrome c oxidase polypeptide.	Uncharacterized protein.	0.952
RP20_CCG005053	RP20_CCG000225	A0A182G895	A0A182G0U0	Uncharacterized protein.	Uncharacterized protein.	0.592
RP20_CCG005053	RP20_CCG003501	A0A182G895	A0A023EGZ5	Uncharacterized protein.	Putative cytochrome c oxidase polypeptide.	0.956