STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP20_CCG005752SRA stem-loop-interacting RNA-binding protein, mitochondrial-like. (92 aa)    
Predicted Functional Partners:
RP20_CCG010407
Uncharacterized protein.
   
 
 0.789
RP20_CCG023951
Uncharacterized protein.
   
 
 0.789
RP20_CCG014171
Putative nadh dehydrogenase ubiquinone.
   
    0.772
RP20_CCG024270
Uncharacterized protein.
   
 0.693
RP20_CCG018364
Small nuclear ribonucleoprotein G.
   
 0.691
RP20_CCG023303
RRM domain-containing protein.
  
 0.685
RP20_CCG022736
RRM domain-containing protein.
  
 0.684
RP20_CCG008878
RRM domain-containing protein.
  
 0.666
RP20_CCG002102
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
  
 
 0.661
RP20_CCG008877
RRM domain-containing protein.
  
 0.660
Your Current Organism:
Aedes albopictus
NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito
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