RP20_CCG010520 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG010520

Putative secreted protein. (162 aa)

Predicted Functional Partners:

RP20_CCG003827

0.882

RP20_CCG025436

0.858

RP20_CCG003747

0.721

RP20_CCG022924

0.697

RP20_CCG014631

0.655

RP20_CCG007802

0.652

RP20_CCG014208

0.652

RP20_CCG010567

0.640

RP20_CCG005953

0.618

RP20_CCG001636

0.617

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG001636	RP20_CCG003747	A0A182G2U4	A0A182G622	Uncharacterized protein.	Uncharacterized protein.	0.974
RP20_CCG001636	RP20_CCG003827	A0A182G2U4	A0A182G661	Uncharacterized protein.	SAP domain-containing protein.	0.986
RP20_CCG001636	RP20_CCG005953	A0A182G2U4	A0A182G9T6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.962
RP20_CCG001636	RP20_CCG007802	A0A182G2U4	A0A023ELN1	Uncharacterized protein.	Putative rrm motif-containing protein.	0.977
RP20_CCG001636	RP20_CCG010520	A0A182G2U4	A0A023EHK3	Uncharacterized protein.	Putative secreted protein.	0.617
RP20_CCG001636	RP20_CCG010567	A0A182G2U4	A0A182GIN2	Uncharacterized protein.	Uncharacterized protein.	0.840
RP20_CCG001636	RP20_CCG014208	A0A182G2U4	A0A182GR02	Uncharacterized protein.	RRM domain-containing protein.	0.977
RP20_CCG001636	RP20_CCG014631	A0A182G2U4	A0A182GRT8	Uncharacterized protein.	Uncharacterized protein.	0.932
RP20_CCG001636	RP20_CCG022924	A0A182G2U4	A0A182H6U2	Uncharacterized protein.	Death domain-containing protein.	0.971
RP20_CCG001636	RP20_CCG025436	A0A182G2U4	A0A182HAQ7	Uncharacterized protein.	Uncharacterized protein.	0.960
RP20_CCG003747	RP20_CCG001636	A0A182G622	A0A182G2U4	Uncharacterized protein.	Uncharacterized protein.	0.974
RP20_CCG003747	RP20_CCG003827	A0A182G622	A0A182G661	Uncharacterized protein.	SAP domain-containing protein.	0.851
RP20_CCG003747	RP20_CCG005953	A0A182G622	A0A182G9T6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
RP20_CCG003747	RP20_CCG007802	A0A182G622	A0A023ELN1	Uncharacterized protein.	Putative rrm motif-containing protein.	0.988
RP20_CCG003747	RP20_CCG010520	A0A182G622	A0A023EHK3	Uncharacterized protein.	Putative secreted protein.	0.721
RP20_CCG003747	RP20_CCG010567	A0A182G622	A0A182GIN2	Uncharacterized protein.	Uncharacterized protein.	0.847
RP20_CCG003747	RP20_CCG014208	A0A182G622	A0A182GR02	Uncharacterized protein.	RRM domain-containing protein.	0.988
RP20_CCG003747	RP20_CCG014631	A0A182G622	A0A182GRT8	Uncharacterized protein.	Uncharacterized protein.	0.895
RP20_CCG003747	RP20_CCG022924	A0A182G622	A0A182H6U2	Uncharacterized protein.	Death domain-containing protein.	0.999
RP20_CCG003747	RP20_CCG025436	A0A182G622	A0A182HAQ7	Uncharacterized protein.	Uncharacterized protein.	0.845