RP20_CCG013738 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG013738

Putative gtp-binding protein. (219 aa)

Predicted Functional Partners:

RP20_CCG011006

0.938

RP20_CCG024101

0.807

RP20_CCG012786

0.802

RP20_CCG017127

0.769

RP20_CCG015426

0.709

RP20_CCG014392

0.706

RP20_CCG023181

0.692

RP20_CCG000856

0.689

RP20_CCG022402

0.689

RP20_CCG015635

0.665

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG000856	RP20_CCG011006	A0A182G1N6	A0A182GJH0	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.807
RP20_CCG000856	RP20_CCG012786	A0A182G1N6	A0A182GN40	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.486
RP20_CCG000856	RP20_CCG013738	A0A182G1N6	A0A023EJY2	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Putative gtp-binding protein.	0.689
RP20_CCG000856	RP20_CCG014392	A0A182G1N6	A0A182GRE1	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.841
RP20_CCG000856	RP20_CCG023181	A0A182G1N6	A0A182H763	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Uncharacterized protein.	0.486
RP20_CCG011006	RP20_CCG000856	A0A182GJH0	A0A182G1N6	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.807
RP20_CCG011006	RP20_CCG012786	A0A182GJH0	A0A182GN40	Uncharacterized protein.	Uncharacterized protein.	0.601
RP20_CCG011006	RP20_CCG013738	A0A182GJH0	A0A023EJY2	Uncharacterized protein.	Putative gtp-binding protein.	0.938
RP20_CCG011006	RP20_CCG014392	A0A182GJH0	A0A182GRE1	Uncharacterized protein.	Uncharacterized protein.	0.402
RP20_CCG011006	RP20_CCG017127	A0A182GJH0	A0A182GWL1	Uncharacterized protein.	Uncharacterized protein.	0.413
RP20_CCG011006	RP20_CCG022402	A0A182GJH0	A0A182H5Y4	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.807
RP20_CCG012786	RP20_CCG000856	A0A182GN40	A0A182G1N6	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.486
RP20_CCG012786	RP20_CCG011006	A0A182GN40	A0A182GJH0	Uncharacterized protein.	Uncharacterized protein.	0.601
RP20_CCG012786	RP20_CCG013738	A0A182GN40	A0A023EJY2	Uncharacterized protein.	Putative gtp-binding protein.	0.802
RP20_CCG012786	RP20_CCG014392	A0A182GN40	A0A182GRE1	Uncharacterized protein.	Uncharacterized protein.	0.749
RP20_CCG012786	RP20_CCG022402	A0A182GN40	A0A182H5Y4	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.486
RP20_CCG013738	RP20_CCG000856	A0A023EJY2	A0A182G1N6	Putative gtp-binding protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.689
RP20_CCG013738	RP20_CCG011006	A0A023EJY2	A0A182GJH0	Putative gtp-binding protein.	Uncharacterized protein.	0.938
RP20_CCG013738	RP20_CCG012786	A0A023EJY2	A0A182GN40	Putative gtp-binding protein.	Uncharacterized protein.	0.802
RP20_CCG013738	RP20_CCG014392	A0A023EJY2	A0A182GRE1	Putative gtp-binding protein.	Uncharacterized protein.	0.706