STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP20_CCG000342Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (591 aa)    
Predicted Functional Partners:
RP20_CCG005698
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
   
 0.931
RP20_CCG016831
CNH domain-containing protein.
   
 0.925
RP20_CCG014226
Uncharacterized protein.
   
 0.921
RP20_CCG009495
Uncharacterized protein.
    
 0.914
RP20_CCG016163
Vps16_C domain-containing protein.
   
 
 0.910
RP20_CCG020280
RING-type domain-containing protein.
    
 
 0.882
RP20_CCG016590
Uncharacterized protein.
    
 
 0.881
RP20_CCG003531
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.879
RP20_CCG024649
Uncharacterized protein.
    
 
 0.879
RP20_CCG005038
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.878
Your Current Organism:
Aedes albopictus
NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.