STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP20_CCG002250VIR_N domain-containing protein. (815 aa)    
Predicted Functional Partners:
RP20_CCG014631
Uncharacterized protein.
   
 
 0.979
RP20_CCG024094
RING-type domain-containing protein.
    
 
 0.923
RP20_CCG010205
Uncharacterized protein.
   
 
 0.810
RP20_CCG026288
Uncharacterized protein.
   
 
 0.810
RP20_CCG020342
Uncharacterized protein; Belongs to the MT-A70-like family.
    
 
 0.751
RP20_CCG011920
Putative n6-adenine methylase involved in transcription regulation; Belongs to the MT-A70-like family.
    
 
 0.677
RP20_CCG007418
Uncharacterized protein.
    
 
 0.648
RP20_CCG001171
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
    
 
 0.617
RP20_CCG001576
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
    
 
 0.594
RP20_CCG024504
Uncharacterized protein.
    
 
 0.589
Your Current Organism:
Aedes albopictus
NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito
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