Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED15 | RP20_CCG003652 | A0A182GWN0 | A0A182G5W9 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | NR LBD domain-containing protein. | 0.606 |
MED15 | RP20_CCG005697 | A0A182GWN0 | A0A182G9E1 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | BHLH domain-containing protein. | 0.804 |
MED15 | RP20_CCG008042 | A0A182GWN0 | A0A182GDH9 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.932 |
MED15 | RP20_CCG021633 | A0A182GWN0 | A0A182H4P0 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.955 |
RP20_CCG002989 | RP20_CCG003652 | A0A182G4V6 | A0A182G5W9 | Uncharacterized protein. | NR LBD domain-containing protein. | 0.628 |
RP20_CCG003652 | MED15 | A0A182G5W9 | A0A182GWN0 | NR LBD domain-containing protein. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.606 |
RP20_CCG003652 | RP20_CCG002989 | A0A182G5W9 | A0A182G4V6 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.628 |
RP20_CCG003652 | RP20_CCG005697 | A0A182G5W9 | A0A182G9E1 | NR LBD domain-containing protein. | BHLH domain-containing protein. | 0.580 |
RP20_CCG003652 | RP20_CCG008042 | A0A182G5W9 | A0A182GDH9 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.544 |
RP20_CCG003652 | RP20_CCG012382 | A0A182G5W9 | A0A182GM98 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.628 |
RP20_CCG003652 | RP20_CCG013110 | A0A182G5W9 | A0A182GNT4 | NR LBD domain-containing protein. | Peptidase_M24 domain-containing protein. | 0.540 |
RP20_CCG003652 | RP20_CCG013806 | A0A182G5W9 | A0A182GQ77 | NR LBD domain-containing protein. | Peptidase_M24 domain-containing protein. | 0.540 |
RP20_CCG003652 | RP20_CCG015609 | A0A182G5W9 | A0A182GTQ3 | NR LBD domain-containing protein. | SANT domain-containing protein. | 0.673 |
RP20_CCG003652 | RP20_CCG021633 | A0A182G5W9 | A0A182H4P0 | NR LBD domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.544 |
RP20_CCG003652 | RP20_CCG023199 | A0A182G5W9 | A0A182H774 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.614 |
RP20_CCG005697 | MED15 | A0A182G9E1 | A0A182GWN0 | BHLH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.804 |
RP20_CCG005697 | RP20_CCG003652 | A0A182G9E1 | A0A182G5W9 | BHLH domain-containing protein. | NR LBD domain-containing protein. | 0.580 |
RP20_CCG005697 | RP20_CCG023199 | A0A182G9E1 | A0A182H774 | BHLH domain-containing protein. | Uncharacterized protein. | 0.685 |
RP20_CCG008042 | MED15 | A0A182GDH9 | A0A182GWN0 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.932 |
RP20_CCG008042 | RP20_CCG003652 | A0A182GDH9 | A0A182G5W9 | Uncharacterized protein. | NR LBD domain-containing protein. | 0.544 |
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