STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP20_CCG003839RRM domain-containing protein. (239 aa)    
Predicted Functional Partners:
RP20_CCG024270
Uncharacterized protein.
   
 0.693
RP20_CCG002102
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
    
 0.534
RP20_CCG027746
MIF4G_like_2 domain-containing protein.
    
 0.534
RP20_CCG025990
Putative dna replication factor/protein phosphatase inhibitor set/spr-2; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.495
RP20_CCG000183
Putative spliceosomal protein snrnp-u1a/u2b.
   
 0.492
RP20_CCG026964
RRM domain-containing protein.
   
 0.492
RP20_CCG007418
Uncharacterized protein.
   
 0.488
RP20_CCG003234
Tr-type G domain-containing protein.
   
 0.473
RP20_CCG005887
Nanos-type domain-containing protein; Belongs to the nanos family.
    
 
 0.472
RP20_CCG018364
Small nuclear ribonucleoprotein G.
   
 0.471
Your Current Organism:
Aedes albopictus
NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito
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