RP20_CCG005472 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG005472

Uncharacterized protein. (571 aa)

Predicted Functional Partners:

RP20_CCG009839

0.943

RP20_CCG010428

0.943

RP20_CCG024143

0.943

RP20_CCG027283

0.941

RP20_CCG005010

0.847

RP20_CCG005186

0.833

RP20_CCG005187

0.833

RP20_CCG014322

0.816

RP20_CCG021024

0.786

RP20_CCG020020

0.785

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG005010	RP20_CCG005472	A0A182G864	A0A182G907	Uncharacterized protein.	Uncharacterized protein.	0.847
RP20_CCG005010	RP20_CCG014322	A0A182G864	A0A023EHD1	Uncharacterized protein.	Putative ubiquitin protein ligase glossina morsitans morsitans; Belongs to the ubiquitin-conjugating enzyme family.	0.503
RP20_CCG005010	RP20_CCG027283	A0A182G864	A0A182HDL9	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.961
RP20_CCG005186	RP20_CCG005472	A0A182G8I5	A0A182G907	Uncharacterized protein.	Uncharacterized protein.	0.833
RP20_CCG005186	RP20_CCG021024	A0A182G8I5	A0A182H3N0	Uncharacterized protein.	Small ubiquitin-related modifier.	0.404
RP20_CCG005187	RP20_CCG005472	A0A182G8I6	A0A182G907	THAP-type domain-containing protein.	Uncharacterized protein.	0.833
RP20_CCG005187	RP20_CCG021024	A0A182G8I6	A0A182H3N0	THAP-type domain-containing protein.	Small ubiquitin-related modifier.	0.404
RP20_CCG005472	RP20_CCG005010	A0A182G907	A0A182G864	Uncharacterized protein.	Uncharacterized protein.	0.847
RP20_CCG005472	RP20_CCG005186	A0A182G907	A0A182G8I5	Uncharacterized protein.	Uncharacterized protein.	0.833
RP20_CCG005472	RP20_CCG005187	A0A182G907	A0A182G8I6	Uncharacterized protein.	THAP-type domain-containing protein.	0.833
RP20_CCG005472	RP20_CCG009839	A0A182G907	A0A182GH75	Uncharacterized protein.	Uncharacterized protein.	0.943
RP20_CCG005472	RP20_CCG010428	A0A182G907	A0A182GID9	Uncharacterized protein.	Uncharacterized protein.	0.943
RP20_CCG005472	RP20_CCG014322	A0A182G907	A0A023EHD1	Uncharacterized protein.	Putative ubiquitin protein ligase glossina morsitans morsitans; Belongs to the ubiquitin-conjugating enzyme family.	0.816
RP20_CCG005472	RP20_CCG020020	A0A182G907	A0A182H1U1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.785
RP20_CCG005472	RP20_CCG021024	A0A182G907	A0A182H3N0	Uncharacterized protein.	Small ubiquitin-related modifier.	0.786
RP20_CCG005472	RP20_CCG024143	A0A182G907	A0A182H8L1	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.943
RP20_CCG005472	RP20_CCG027283	A0A182G907	A0A182HDL9	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.941
RP20_CCG009839	RP20_CCG005472	A0A182GH75	A0A182G907	Uncharacterized protein.	Uncharacterized protein.	0.943
RP20_CCG009839	RP20_CCG021024	A0A182GH75	A0A182H3N0	Uncharacterized protein.	Small ubiquitin-related modifier.	0.404
RP20_CCG010428	RP20_CCG005472	A0A182GID9	A0A182G907	Uncharacterized protein.	Uncharacterized protein.	0.943