RP20_CCG006838 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG006838

Uncharacterized protein. (125 aa)

Predicted Functional Partners:

RP20_CCG015971

0.848

RP20_CCG028602

0.848

RP20_CCG002010

0.750

RP20_CCG007794

0.750

RP20_CCG023618

0.750

RP20_CCG011501

0.707

RP20_CCG015621

0.707

RP20_CCG023822

0.687

RP20_CCG025987

0.677

RP20_CCG008727

0.545

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG002010	RP20_CCG006838	A0A182G3A7	A0A182GBA5	THAP-type domain-containing protein.	Uncharacterized protein.	0.750
RP20_CCG002010	RP20_CCG008727	A0A182G3A7	A0A182GEX1	THAP-type domain-containing protein.	Tudor domain-containing protein.	0.459
RP20_CCG002010	RP20_CCG011501	A0A182G3A7	A0A182GKJ0	THAP-type domain-containing protein.	Uncharacterized protein.	0.401
RP20_CCG002010	RP20_CCG015621	A0A182G3A7	A0A182GTR5	THAP-type domain-containing protein.	Uncharacterized protein.	0.401
RP20_CCG002010	RP20_CCG025987	A0A182G3A7	A0A182HBK6	THAP-type domain-containing protein.	Tudor domain-containing protein.	0.459
RP20_CCG006838	RP20_CCG002010	A0A182GBA5	A0A182G3A7	Uncharacterized protein.	THAP-type domain-containing protein.	0.750
RP20_CCG006838	RP20_CCG007794	A0A182GBA5	A0A182GD13	Uncharacterized protein.	THAP-type domain-containing protein.	0.750
RP20_CCG006838	RP20_CCG008727	A0A182GBA5	A0A182GEX1	Uncharacterized protein.	Tudor domain-containing protein.	0.545
RP20_CCG006838	RP20_CCG011501	A0A182GBA5	A0A182GKJ0	Uncharacterized protein.	Uncharacterized protein.	0.707
RP20_CCG006838	RP20_CCG015621	A0A182GBA5	A0A182GTR5	Uncharacterized protein.	Uncharacterized protein.	0.707
RP20_CCG006838	RP20_CCG015971	A0A182GBA5	A0A023EQD8	Uncharacterized protein.	Hipothetical protein; Belongs to the protein kinase superfamily.	0.848
RP20_CCG006838	RP20_CCG023618	A0A182GBA5	A0A182H7U6	Uncharacterized protein.	Uncharacterized protein.	0.750
RP20_CCG006838	RP20_CCG023822	A0A182GBA5	A0A182H866	Uncharacterized protein.	Uncharacterized protein.	0.687
RP20_CCG006838	RP20_CCG025987	A0A182GBA5	A0A182HBK6	Uncharacterized protein.	Tudor domain-containing protein.	0.677
RP20_CCG006838	RP20_CCG028602	A0A182GBA5	A0A182HFI3	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.848
RP20_CCG007794	RP20_CCG006838	A0A182GD13	A0A182GBA5	THAP-type domain-containing protein.	Uncharacterized protein.	0.750
RP20_CCG007794	RP20_CCG008727	A0A182GD13	A0A182GEX1	THAP-type domain-containing protein.	Tudor domain-containing protein.	0.459
RP20_CCG007794	RP20_CCG011501	A0A182GD13	A0A182GKJ0	THAP-type domain-containing protein.	Uncharacterized protein.	0.401
RP20_CCG007794	RP20_CCG015621	A0A182GD13	A0A182GTR5	THAP-type domain-containing protein.	Uncharacterized protein.	0.401
RP20_CCG007794	RP20_CCG025987	A0A182GD13	A0A182HBK6	THAP-type domain-containing protein.	Tudor domain-containing protein.	0.459