RP20_CCG007803 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG007803

Rad51 domain-containing protein. (303 aa)

Predicted Functional Partners:

RP20_CCG017213

0.982

RP20_CCG025937

0.960

RP20_CCG000490

0.941

RP20_CCG019488

0.912

RP20_CCG012572

0.899

RP20_CCG009962

0.819

RP20_CCG005594

0.805

RP20_CCG014548

0.767

RP20_CCG020471

0.691

RP20_CCG018799

0.685

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG000490	RP20_CCG005594	A0A182G172	A0A182G980	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.994
RP20_CCG000490	RP20_CCG007803	A0A182G172	A0A182GD22	Uncharacterized protein.	Rad51 domain-containing protein.	0.941
RP20_CCG000490	RP20_CCG009962	A0A182G172	A0A182GHG3	Uncharacterized protein.	Uncharacterized protein.	0.966
RP20_CCG000490	RP20_CCG012572	A0A182G172	A0A182GMN0	Uncharacterized protein.	RECA_2 domain-containing protein.	0.985
RP20_CCG000490	RP20_CCG014548	A0A182G172	A0A182GRP3	Uncharacterized protein.	Uncharacterized protein.	0.995
RP20_CCG000490	RP20_CCG017213	A0A182G172	A0A182GWR7	Uncharacterized protein.	RECA_2 domain-containing protein.	0.994
RP20_CCG000490	RP20_CCG018799	A0A182G172	A0A182GZP0	Uncharacterized protein.	Uncharacterized protein.	0.477
RP20_CCG000490	RP20_CCG019488	A0A182G172	A0A182H0X9	Uncharacterized protein.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.994
RP20_CCG000490	RP20_CCG020471	A0A182G172	A0A182H2M8	Uncharacterized protein.	HELICc2 domain-containing protein.	0.968
RP20_CCG000490	RP20_CCG025937	A0A182G172	A0A182HBH9	Uncharacterized protein.	RECA_2 domain-containing protein.	0.981
RP20_CCG005594	RP20_CCG000490	A0A182G980	A0A182G172	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	Uncharacterized protein.	0.994
RP20_CCG005594	RP20_CCG007803	A0A182G980	A0A182GD22	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	Rad51 domain-containing protein.	0.805
RP20_CCG005594	RP20_CCG009962	A0A182G980	A0A182GHG3	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	Uncharacterized protein.	0.810
RP20_CCG005594	RP20_CCG012572	A0A182G980	A0A182GMN0	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	RECA_2 domain-containing protein.	0.876
RP20_CCG005594	RP20_CCG014548	A0A182G980	A0A182GRP3	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	Uncharacterized protein.	0.984
RP20_CCG005594	RP20_CCG017213	A0A182G980	A0A182GWR7	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	RECA_2 domain-containing protein.	0.882
RP20_CCG005594	RP20_CCG018799	A0A182G980	A0A182GZP0	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	Uncharacterized protein.	0.954
RP20_CCG005594	RP20_CCG019488	A0A182G980	A0A182H0X9	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.	0.940
RP20_CCG005594	RP20_CCG020471	A0A182G980	A0A182H2M8	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	HELICc2 domain-containing protein.	0.949
RP20_CCG005594	RP20_CCG025937	A0A182G980	A0A182HBH9	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	RECA_2 domain-containing protein.	0.875