RP20_CCG008042 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG008042

Uncharacterized protein. (260 aa)

Predicted Functional Partners:

RP20_CCG019426

0.989

RP20_CCG020547

0.989

RP20_CCG020459

0.988

RP20_CCG017139

0.987

RP20_CCG014051

0.987

RP20_CCG009372

0.986

RP20_CCG003471

0.986

RP20_CCG014531

0.985

RP20_CCG002564

0.985

RP20_CCG001173

0.985

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG001173	RP20_CCG002564	A0A182GAX5	A0A182G469	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.998
RP20_CCG001173	RP20_CCG003471	A0A182GAX5	A0A182G5L7	Uncharacterized protein.	Uncharacterized protein.	0.999
RP20_CCG001173	RP20_CCG008042	A0A182GAX5	A0A182GDH9	Uncharacterized protein.	Uncharacterized protein.	0.985
RP20_CCG001173	RP20_CCG009372	A0A182GAX5	A0A023EF46	Uncharacterized protein.	Putative 60s ribosomal protein l30.	0.999
RP20_CCG001173	RP20_CCG014051	A0A182GAX5	A0A2Z6YX33	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
RP20_CCG001173	RP20_CCG014531	A0A182GAX5	A0A023EQJ9	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
RP20_CCG001173	RP20_CCG017139	A0A182GAX5	A0A182GWM0	Uncharacterized protein.	Uncharacterized protein.	0.999
RP20_CCG001173	RP20_CCG019426	A0A182GAX5	A0A023EEF4	Uncharacterized protein.	Putative 60s ribosomal protein l32.	0.999
RP20_CCG001173	RP20_CCG020459	A0A182GAX5	A0A182H2L7	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.999
RP20_CCG001173	RP20_CCG020547	A0A182GAX5	A0A182H2T3	Uncharacterized protein.	60S ribosomal protein L5.	0.999
RP20_CCG002564	RP20_CCG001173	A0A182G469	A0A182GAX5	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.998
RP20_CCG002564	RP20_CCG003471	A0A182G469	A0A182G5L7	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.999
RP20_CCG002564	RP20_CCG008042	A0A182G469	A0A182GDH9	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.985
RP20_CCG002564	RP20_CCG009372	A0A182G469	A0A023EF46	Ribosomal_L7Ae domain-containing protein.	Putative 60s ribosomal protein l30.	0.999
RP20_CCG002564	RP20_CCG014051	A0A182G469	A0A2Z6YX33	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
RP20_CCG002564	RP20_CCG014531	A0A182G469	A0A023EQJ9	Ribosomal_L7Ae domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
RP20_CCG002564	RP20_CCG017139	A0A182G469	A0A182GWM0	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.999
RP20_CCG002564	RP20_CCG019426	A0A182G469	A0A023EEF4	Ribosomal_L7Ae domain-containing protein.	Putative 60s ribosomal protein l32.	0.999
RP20_CCG002564	RP20_CCG020459	A0A182G469	A0A182H2L7	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L14e domain-containing protein.	0.999
RP20_CCG002564	RP20_CCG020547	A0A182G469	A0A182H2T3	Ribosomal_L7Ae domain-containing protein.	60S ribosomal protein L5.	0.999