RP20_CCG008347 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG008347

AB hydrolase-1 domain-containing protein. (550 aa)

Predicted Functional Partners:

RP20_CCG023640

0.578

RP20_CCG018615

0.546

RP20_CCG003368

0.534

RP20_CCG011430

0.528

RP20_CCG025989

0.524

RP20_CCG003833

0.524

RP20_CCG005021

0.523

RP20_CCG026924

0.501

RP20_CCG007724

0.489

RP20_CCG025793

0.489

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG003368	RP20_CCG008347	A0A182G5F6	A0A182GE44	Uncharacterized protein.	AB hydrolase-1 domain-containing protein.	0.534
RP20_CCG003368	RP20_CCG018615	A0A182G5F6	A0A182GZD2	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.474
RP20_CCG003833	RP20_CCG007724	A0A182G667	A0A182GCV8	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.990
RP20_CCG003833	RP20_CCG008347	A0A182G667	A0A182GE44	Uncharacterized protein.	AB hydrolase-1 domain-containing protein.	0.524
RP20_CCG003833	RP20_CCG018615	A0A182G667	A0A182GZD2	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.773
RP20_CCG003833	RP20_CCG023640	A0A182G667	A0A023ENY5	Uncharacterized protein.	ATP synthase subunit gamma.	0.996
RP20_CCG003833	RP20_CCG025793	A0A182G667	A0A182HB90	Uncharacterized protein.	Uncharacterized protein.	0.927
RP20_CCG005021	RP20_CCG008347	A0A182G870	A0A182GE44	Lactamase_B domain-containing protein.	AB hydrolase-1 domain-containing protein.	0.523
RP20_CCG005021	RP20_CCG018615	A0A182G870	A0A182GZD2	Lactamase_B domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.639
RP20_CCG007724	RP20_CCG003833	A0A182GCV8	A0A182G667	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.990
RP20_CCG007724	RP20_CCG008347	A0A182GCV8	A0A182GE44	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	AB hydrolase-1 domain-containing protein.	0.489
RP20_CCG007724	RP20_CCG023640	A0A182GCV8	A0A023ENY5	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
RP20_CCG007724	RP20_CCG025989	A0A182GCV8	A0A023EJP6	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Putative mitochondrial f1f0-atp synthase subunit oscp/atp5.	0.990
RP20_CCG008347	RP20_CCG003368	A0A182GE44	A0A182G5F6	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.534
RP20_CCG008347	RP20_CCG003833	A0A182GE44	A0A182G667	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.524
RP20_CCG008347	RP20_CCG005021	A0A182GE44	A0A182G870	AB hydrolase-1 domain-containing protein.	Lactamase_B domain-containing protein.	0.523
RP20_CCG008347	RP20_CCG007724	A0A182GE44	A0A182GCV8	AB hydrolase-1 domain-containing protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.489
RP20_CCG008347	RP20_CCG011430	A0A182GE44	A0A182GKD3	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.528
RP20_CCG008347	RP20_CCG018615	A0A182GE44	A0A182GZD2	AB hydrolase-1 domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.546
RP20_CCG008347	RP20_CCG023640	A0A182GE44	A0A023ENY5	AB hydrolase-1 domain-containing protein.	ATP synthase subunit gamma.	0.578