RP20_CCG008348 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG008348

Nipped-B protein. (2111 aa)

Predicted Functional Partners:

RP20_CCG022632

0.996

RP20_CCG024525

0.996

RP20_CCG004636

0.994

RP20_CCG002891

0.976

RP20_CCG020987

0.971

RP20_CCG024825

0.971

RP20_CCG009741

0.970

RP20_CCG001094

0.921

RP20_CCG027599

0.918

RP20_CCG007718

0.847

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG001094	RP20_CCG002891	A0A023EG63	A0A182G4Q8	Putative microtubule-binding protein mip-t3.	Uncharacterized protein.	0.762
RP20_CCG001094	RP20_CCG004636	A0A023EG63	A0A182G7H5	Putative microtubule-binding protein mip-t3.	SCD domain-containing protein.	0.973
RP20_CCG001094	RP20_CCG007718	A0A023EG63	A0A182GCV3	Putative microtubule-binding protein mip-t3.	Uncharacterized protein.	0.871
RP20_CCG001094	RP20_CCG008348	A0A023EG63	A0A182GE45	Putative microtubule-binding protein mip-t3.	Nipped-B protein.	0.921
RP20_CCG001094	RP20_CCG020987	A0A023EG63	A0A182H3K6	Putative microtubule-binding protein mip-t3.	Uncharacterized protein.	0.908
RP20_CCG001094	RP20_CCG022632	A0A023EG63	A0A182H6B1	Putative microtubule-binding protein mip-t3.	Uncharacterized protein.	0.969
RP20_CCG001094	RP20_CCG024525	A0A023EG63	A0A182H986	Putative microtubule-binding protein mip-t3.	Structural maintenance of chromosomes protein.	0.974
RP20_CCG001094	RP20_CCG024825	A0A023EG63	A0A182H9P5	Putative microtubule-binding protein mip-t3.	SMC_N domain-containing protein.	0.908
RP20_CCG001094	RP20_CCG027599	A0A023EG63	A0A182HE17	Putative microtubule-binding protein mip-t3.	SMC_N domain-containing protein.	0.802
RP20_CCG002891	RP20_CCG001094	A0A182G4Q8	A0A023EG63	Uncharacterized protein.	Putative microtubule-binding protein mip-t3.	0.762
RP20_CCG002891	RP20_CCG004636	A0A182G4Q8	A0A182G7H5	Uncharacterized protein.	SCD domain-containing protein.	0.849
RP20_CCG002891	RP20_CCG007718	A0A182G4Q8	A0A182GCV3	Uncharacterized protein.	Uncharacterized protein.	0.772
RP20_CCG002891	RP20_CCG008348	A0A182G4Q8	A0A182GE45	Uncharacterized protein.	Nipped-B protein.	0.976
RP20_CCG002891	RP20_CCG009741	A0A182G4Q8	A0A182GH06	Uncharacterized protein.	Uncharacterized protein.	0.839
RP20_CCG002891	RP20_CCG020987	A0A182G4Q8	A0A182H3K6	Uncharacterized protein.	Uncharacterized protein.	0.780
RP20_CCG002891	RP20_CCG022632	A0A182G4Q8	A0A182H6B1	Uncharacterized protein.	Uncharacterized protein.	0.858
RP20_CCG002891	RP20_CCG024525	A0A182G4Q8	A0A182H986	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.836
RP20_CCG002891	RP20_CCG024825	A0A182G4Q8	A0A182H9P5	Uncharacterized protein.	SMC_N domain-containing protein.	0.780
RP20_CCG002891	RP20_CCG027599	A0A182G4Q8	A0A182HE17	Uncharacterized protein.	SMC_N domain-containing protein.	0.694
RP20_CCG004636	RP20_CCG001094	A0A182G7H5	A0A023EG63	SCD domain-containing protein.	Putative microtubule-binding protein mip-t3.	0.973