RP20_CCG008367 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG008367

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (292 aa)

Predicted Functional Partners:

RP20_CCG011821

0.965

RP20_CCG018184

0.965

RP20_CCG027133

0.963

RP20_CCG005253

0.953

RP20_CCG024804

0.953

RP20_CCG027040

0.951

RP20_CCG017592

0.948

RP20_CCG007693

0.916

RP20_CCG011015

0.916

RP20_CCG007494

0.907

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG005253	RP20_CCG007494	A0A023EUH3	A0A182GCG8	Putative rna polymer.	Uncharacterized protein.	0.947
RP20_CCG005253	RP20_CCG007693	A0A023EUH3	A0A182GCT5	Putative rna polymer.	Uncharacterized protein.	0.977
RP20_CCG005253	RP20_CCG008367	A0A023EUH3	A0A182GE59	Putative rna polymer.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.953
RP20_CCG005253	RP20_CCG011015	A0A023EUH3	A0A182GJH6	Putative rna polymer.	Uncharacterized protein.	0.977
RP20_CCG005253	RP20_CCG011821	A0A023EUH3	A0A182GL64	Putative rna polymer.	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.996
RP20_CCG005253	RP20_CCG017592	A0A023EUH3	A0A182GXH3	Putative rna polymer.	HTH TFE/IIEalpha-type domain-containing protein.	0.996
RP20_CCG005253	RP20_CCG018184	A0A023EUH3	A0A182GYI0	Putative rna polymer.	Uncharacterized protein; Belongs to the cyclin family.	0.995
RP20_CCG005253	RP20_CCG024804	A0A023EUH3	A0A182H9N0	Putative rna polymer.	Uncharacterized protein.	0.998
RP20_CCG005253	RP20_CCG027040	A0A023EUH3	A0A182HD83	Putative rna polymer.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.998
RP20_CCG005253	RP20_CCG027133	A0A023EUH3	A0A182HDD5	Putative rna polymer.	Helicase ATP-binding domain-containing protein.	0.998
RP20_CCG007494	RP20_CCG005253	A0A182GCG8	A0A023EUH3	Uncharacterized protein.	Putative rna polymer.	0.947
RP20_CCG007494	RP20_CCG007693	A0A182GCG8	A0A182GCT5	Uncharacterized protein.	Uncharacterized protein.	0.825
RP20_CCG007494	RP20_CCG008367	A0A182GCG8	A0A182GE59	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.907
RP20_CCG007494	RP20_CCG011015	A0A182GCG8	A0A182GJH6	Uncharacterized protein.	Uncharacterized protein.	0.825
RP20_CCG007494	RP20_CCG011821	A0A182GCG8	A0A182GL64	Uncharacterized protein.	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.940
RP20_CCG007494	RP20_CCG017592	A0A182GCG8	A0A182GXH3	Uncharacterized protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.961
RP20_CCG007494	RP20_CCG018184	A0A182GCG8	A0A182GYI0	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.950
RP20_CCG007494	RP20_CCG024804	A0A182GCG8	A0A182H9N0	Uncharacterized protein.	Uncharacterized protein.	0.957
RP20_CCG007494	RP20_CCG027040	A0A182GCG8	A0A182HD83	Uncharacterized protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.931
RP20_CCG007494	RP20_CCG027133	A0A182GCG8	A0A182HDD5	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.931