Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RP20_CCG003500 | RP20_CCG008595 | A0A182G5M9 | A0A182GEM8 | CS domain-containing protein. | NR LBD domain-containing protein. | 0.414 |
RP20_CCG007504 | RP20_CCG008595 | A0A182GCH4 | A0A182GEM8 | C2H2-type domain-containing protein. | NR LBD domain-containing protein. | 0.656 |
RP20_CCG008042 | RP20_CCG008595 | A0A182GDH9 | A0A182GEM8 | Uncharacterized protein. | NR LBD domain-containing protein. | 0.482 |
RP20_CCG008042 | RP20_CCG015609 | A0A182GDH9 | A0A182GTQ3 | Uncharacterized protein. | SANT domain-containing protein. | 0.551 |
RP20_CCG008042 | RP20_CCG023199 | A0A182GDH9 | A0A182H774 | Uncharacterized protein. | Uncharacterized protein. | 0.684 |
RP20_CCG008595 | RP20_CCG003500 | A0A182GEM8 | A0A182G5M9 | NR LBD domain-containing protein. | CS domain-containing protein. | 0.414 |
RP20_CCG008595 | RP20_CCG007504 | A0A182GEM8 | A0A182GCH4 | NR LBD domain-containing protein. | C2H2-type domain-containing protein. | 0.656 |
RP20_CCG008595 | RP20_CCG008042 | A0A182GEM8 | A0A182GDH9 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.482 |
RP20_CCG008595 | RP20_CCG014322 | A0A182GEM8 | A0A023EHD1 | NR LBD domain-containing protein. | Putative ubiquitin protein ligase glossina morsitans morsitans; Belongs to the ubiquitin-conjugating enzyme family. | 0.525 |
RP20_CCG008595 | RP20_CCG015609 | A0A182GEM8 | A0A182GTQ3 | NR LBD domain-containing protein. | SANT domain-containing protein. | 0.723 |
RP20_CCG008595 | RP20_CCG021633 | A0A182GEM8 | A0A182H4P0 | NR LBD domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.482 |
RP20_CCG008595 | RP20_CCG023199 | A0A182GEM8 | A0A182H774 | NR LBD domain-containing protein. | Uncharacterized protein. | 0.438 |
RP20_CCG014322 | RP20_CCG008595 | A0A023EHD1 | A0A182GEM8 | Putative ubiquitin protein ligase glossina morsitans morsitans; Belongs to the ubiquitin-conjugating enzyme family. | NR LBD domain-containing protein. | 0.525 |
RP20_CCG014322 | RP20_CCG023199 | A0A023EHD1 | A0A182H774 | Putative ubiquitin protein ligase glossina morsitans morsitans; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.625 |
RP20_CCG015609 | RP20_CCG008042 | A0A182GTQ3 | A0A182GDH9 | SANT domain-containing protein. | Uncharacterized protein. | 0.551 |
RP20_CCG015609 | RP20_CCG008595 | A0A182GTQ3 | A0A182GEM8 | SANT domain-containing protein. | NR LBD domain-containing protein. | 0.723 |
RP20_CCG015609 | RP20_CCG021633 | A0A182GTQ3 | A0A182H4P0 | SANT domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.551 |
RP20_CCG015609 | RP20_CCG023199 | A0A182GTQ3 | A0A182H774 | SANT domain-containing protein. | Uncharacterized protein. | 0.760 |
RP20_CCG021633 | RP20_CCG008595 | A0A182H4P0 | A0A182GEM8 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | NR LBD domain-containing protein. | 0.482 |
RP20_CCG021633 | RP20_CCG015609 | A0A182H4P0 | A0A182GTQ3 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | SANT domain-containing protein. | 0.551 |
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