STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP20_CCG008843Uncharacterized protein. (748 aa)    
Predicted Functional Partners:
RP20_CCG012553
Uncharacterized protein; Belongs to the RNR ribonuclease family.
   
 
 0.893
RP20_CCG020474
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
   
 
 0.893
RP20_CCG024654
Uncharacterized protein.
   
  
 0.816
RP20_CCG018917
S1 motif domain-containing protein.
   
 
 0.703
RP20_CCG019929
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 
 0.602
RP20_CCG000667
Uncharacterized protein.
    
 
 0.561
RP20_CCG027288
Uncharacterized protein.
   
  
 0.545
RP20_CCG015765
Helicase C-terminal domain-containing protein.
    
 
 0.528
RP20_CCG026345
Putative mrna splicing factor atp-dependent rna helicase.
      
 0.527
RP20_CCG002395
Uncharacterized protein.
    
 
 0.527
Your Current Organism:
Aedes albopictus
NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito
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