RP20_CCG010388 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG010388

Uncharacterized protein. (601 aa)

Predicted Functional Partners:

RP20_CCG007985

0.758

RP20_CCG026635

0.613

RP20_CCG019935

0.598

RP20_CCG013225

0.579

RP20_CCG009707

0.451

RP20_CCG015541

0.421

RP20_CCG028038

0.421

RP20_CCG006520

0.417

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG006520	RP20_CCG010388	A0A182GAR6	A0A182GIB0	Plexin_cytopl domain-containing protein.	Uncharacterized protein.	0.417
RP20_CCG006520	RP20_CCG013225	A0A182GAR6	A0A182GP17	Plexin_cytopl domain-containing protein.	Uncharacterized protein.	0.530
RP20_CCG007985	RP20_CCG010388	A0A182GDD2	A0A182GIB0	FERM domain-containing protein.	Uncharacterized protein.	0.758
RP20_CCG009707	RP20_CCG010388	A0A182GGX8	A0A182GIB0	Anion exchange protein.	Uncharacterized protein.	0.451
RP20_CCG009707	RP20_CCG013225	A0A182GGX8	A0A182GP17	Anion exchange protein.	Uncharacterized protein.	0.628
RP20_CCG010388	RP20_CCG006520	A0A182GIB0	A0A182GAR6	Uncharacterized protein.	Plexin_cytopl domain-containing protein.	0.417
RP20_CCG010388	RP20_CCG007985	A0A182GIB0	A0A182GDD2	Uncharacterized protein.	FERM domain-containing protein.	0.758
RP20_CCG010388	RP20_CCG009707	A0A182GIB0	A0A182GGX8	Uncharacterized protein.	Anion exchange protein.	0.451
RP20_CCG010388	RP20_CCG013225	A0A182GIB0	A0A182GP17	Uncharacterized protein.	Uncharacterized protein.	0.579
RP20_CCG010388	RP20_CCG015541	A0A182GIB0	A0A182GTK7	Uncharacterized protein.	Uncharacterized protein.	0.421
RP20_CCG010388	RP20_CCG019935	A0A182GIB0	A0A182H1N8	Uncharacterized protein.	Plexin_cytopl domain-containing protein.	0.598
RP20_CCG010388	RP20_CCG026635	A0A182GIB0	A0A182HCK8	Uncharacterized protein.	Uncharacterized protein.	0.613
RP20_CCG010388	RP20_CCG028038	A0A182GIB0	A0A182HEP0	Uncharacterized protein.	Uncharacterized protein.	0.421
RP20_CCG013225	RP20_CCG006520	A0A182GP17	A0A182GAR6	Uncharacterized protein.	Plexin_cytopl domain-containing protein.	0.530
RP20_CCG013225	RP20_CCG009707	A0A182GP17	A0A182GGX8	Uncharacterized protein.	Anion exchange protein.	0.628
RP20_CCG013225	RP20_CCG010388	A0A182GP17	A0A182GIB0	Uncharacterized protein.	Uncharacterized protein.	0.579
RP20_CCG013225	RP20_CCG019935	A0A182GP17	A0A182H1N8	Uncharacterized protein.	Plexin_cytopl domain-containing protein.	0.859
RP20_CCG015541	RP20_CCG010388	A0A182GTK7	A0A182GIB0	Uncharacterized protein.	Uncharacterized protein.	0.421
RP20_CCG015541	RP20_CCG028038	A0A182GTK7	A0A182HEP0	Uncharacterized protein.	Uncharacterized protein.	0.523
RP20_CCG019935	RP20_CCG010388	A0A182H1N8	A0A182GIB0	Plexin_cytopl domain-containing protein.	Uncharacterized protein.	0.598