RP20_CCG010399 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG010399

Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (318 aa)

Predicted Functional Partners:

RP20_CCG025057

0.965

RP20_CCG020473

0.920

RP20_CCG026888

0.911

RP20_CCG027441

0.911

RP20_CCG028497

0.889

RP20_CCG015965

0.844

RP20_CCG026963

0.836

RP20_CCG023199

0.827

RP20_CCG011887

0.821

RP20_CCG018201

0.821

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG010399	RP20_CCG011887	A0A182GIB9	A0A182GLA7	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.821
RP20_CCG010399	RP20_CCG015965	A0A182GIB9	A0A182GUF8	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein; Belongs to the cullin family.	0.844
RP20_CCG010399	RP20_CCG018201	A0A182GIB9	A0A182GYJ3	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein.	0.821
RP20_CCG010399	RP20_CCG020473	A0A182GIB9	A0A182H2N0	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.920
RP20_CCG010399	RP20_CCG023199	A0A182GIB9	A0A182H774	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.827
RP20_CCG010399	RP20_CCG025057	A0A182GIB9	A0A182HA27	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.965
RP20_CCG010399	RP20_CCG026888	A0A182GIB9	A0A182HCZ6	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.911
RP20_CCG010399	RP20_CCG026963	A0A182GIB9	A0A182HD32	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	F-box domain-containing protein.	0.836
RP20_CCG010399	RP20_CCG027441	A0A182GIB9	A0A182HDT5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	RB_B domain-containing protein.	0.911
RP20_CCG010399	RP20_CCG028497	A0A182GIB9	A0A182HFC8	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.889
RP20_CCG011887	RP20_CCG010399	A0A182GLA7	A0A182GIB9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.821
RP20_CCG011887	RP20_CCG015965	A0A182GLA7	A0A182GUF8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the cullin family.	0.663
RP20_CCG011887	RP20_CCG025057	A0A182GLA7	A0A182HA27	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.787
RP20_CCG011887	RP20_CCG026888	A0A182GLA7	A0A182HCZ6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.677
RP20_CCG011887	RP20_CCG026963	A0A182GLA7	A0A182HD32	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	F-box domain-containing protein.	0.774
RP20_CCG011887	RP20_CCG027441	A0A182GLA7	A0A182HDT5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RB_B domain-containing protein.	0.677
RP20_CCG015965	RP20_CCG010399	A0A182GUF8	A0A182GIB9	Uncharacterized protein; Belongs to the cullin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.844
RP20_CCG015965	RP20_CCG011887	A0A182GUF8	A0A182GLA7	Uncharacterized protein; Belongs to the cullin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.663
RP20_CCG015965	RP20_CCG018201	A0A182GUF8	A0A182GYJ3	Uncharacterized protein; Belongs to the cullin family.	Protein kinase domain-containing protein.	0.663
RP20_CCG015965	RP20_CCG020473	A0A182GUF8	A0A182H2N0	Uncharacterized protein; Belongs to the cullin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.663