RP20_CCG010484 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG010484

Uncharacterized protein. (298 aa)

Predicted Functional Partners:

RP20_CCG007989

0.553

RP20_CCG022631

0.536

RP20_CCG001149

0.506

RP20_CCG019388

0.506

RP20_CCG020315

0.484

RP20_CCG001481

0.483

RP20_CCG008896

0.475

RP20_CCG013000

0.456

RP20_CCG017127

0.444

RP20_CCG027167

0.442

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG001149	RP20_CCG010484	A0A182G238	A0A182GIH7	Uncharacterized protein.	Uncharacterized protein.	0.506
RP20_CCG001149	RP20_CCG017127	A0A182G238	A0A182GWL1	Uncharacterized protein.	Uncharacterized protein.	0.995
RP20_CCG001149	RP20_CCG019388	A0A182G238	A0A182H0Q8	Uncharacterized protein.	PDZ domain-containing protein.	0.906
RP20_CCG001481	RP20_CCG007989	A0A182G2K4	A0A023EMP0	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.998
RP20_CCG001481	RP20_CCG008896	A0A182G2K4	A0A182GF82	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Uncharacterized protein.	0.991
RP20_CCG001481	RP20_CCG010484	A0A182G2K4	A0A182GIH7	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Uncharacterized protein.	0.483
RP20_CCG001481	RP20_CCG020315	A0A182G2K4	A0A182H2B9	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Uncharacterized protein.	0.994
RP20_CCG001481	RP20_CCG022631	A0A182G2K4	A0A023EJT5	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Putative gtpase rab1/ypt1 small g protein superfamily.	0.585
RP20_CCG007989	RP20_CCG001481	A0A023EMP0	A0A182G2K4	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.998
RP20_CCG007989	RP20_CCG008896	A0A023EMP0	A0A182GF82	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Uncharacterized protein.	0.982
RP20_CCG007989	RP20_CCG010484	A0A023EMP0	A0A182GIH7	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Uncharacterized protein.	0.553
RP20_CCG007989	RP20_CCG020315	A0A023EMP0	A0A182H2B9	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Uncharacterized protein.	0.986
RP20_CCG008896	RP20_CCG001481	A0A182GF82	A0A182G2K4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.991
RP20_CCG008896	RP20_CCG007989	A0A182GF82	A0A023EMP0	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.982
RP20_CCG008896	RP20_CCG010484	A0A182GF82	A0A182GIH7	Uncharacterized protein.	Uncharacterized protein.	0.475
RP20_CCG008896	RP20_CCG020315	A0A182GF82	A0A182H2B9	Uncharacterized protein.	Uncharacterized protein.	0.897
RP20_CCG010484	RP20_CCG001149	A0A182GIH7	A0A182G238	Uncharacterized protein.	Uncharacterized protein.	0.506
RP20_CCG010484	RP20_CCG001481	A0A182GIH7	A0A182G2K4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.483
RP20_CCG010484	RP20_CCG007989	A0A182GIH7	A0A023EMP0	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.553
RP20_CCG010484	RP20_CCG008896	A0A182GIH7	A0A182GF82	Uncharacterized protein.	Uncharacterized protein.	0.475