RP20_CCG010548 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG010548

Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (120 aa)

Predicted Functional Partners:

RP20_CCG002514

0.734

RP20_CCG020908

0.646

RP20_CCG008876

0.618

RP20_CCG011014

0.591

RP20_CCG014905

0.591

RP20_CCG019274

0.570

RP20_CCG025639

0.550

RP20_CCG024531

0.432

RP20_CCG016759

0.418

RP20_CCG011681

0.409

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG002514	RP20_CCG008876	A0A182G438	A0A023EHS9	Uncharacterized protein.	Putative ferredoxin 1-like protein.	0.780
RP20_CCG002514	RP20_CCG010548	A0A182G438	A0A182GIM0	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.734
RP20_CCG002514	RP20_CCG011014	A0A182G438	A0A182GJH5	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.480
RP20_CCG002514	RP20_CCG014905	A0A182G438	A0A182GSD7	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.480
RP20_CCG002514	RP20_CCG019274	A0A182G438	A0A023EEY5	Uncharacterized protein.	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.651
RP20_CCG002514	RP20_CCG020908	A0A182G438	A0A182H3F0	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.675
RP20_CCG002514	RP20_CCG025639	A0A182G438	A0A182HB15	Uncharacterized protein.	Uncharacterized protein.	0.675
RP20_CCG008876	RP20_CCG002514	A0A023EHS9	A0A182G438	Putative ferredoxin 1-like protein.	Uncharacterized protein.	0.780
RP20_CCG008876	RP20_CCG010548	A0A023EHS9	A0A182GIM0	Putative ferredoxin 1-like protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.618
RP20_CCG008876	RP20_CCG011014	A0A023EHS9	A0A182GJH5	Putative ferredoxin 1-like protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.518
RP20_CCG008876	RP20_CCG014905	A0A023EHS9	A0A182GSD7	Putative ferredoxin 1-like protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.518
RP20_CCG008876	RP20_CCG019274	A0A023EHS9	A0A023EEY5	Putative ferredoxin 1-like protein.	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.518
RP20_CCG010548	RP20_CCG002514	A0A182GIM0	A0A182G438	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Uncharacterized protein.	0.734
RP20_CCG010548	RP20_CCG008876	A0A182GIM0	A0A023EHS9	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Putative ferredoxin 1-like protein.	0.618
RP20_CCG010548	RP20_CCG011014	A0A182GIM0	A0A182GJH5	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.591
RP20_CCG010548	RP20_CCG011681	A0A182GIM0	A0A182GKW4	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Uncharacterized protein.	0.409
RP20_CCG010548	RP20_CCG014905	A0A182GIM0	A0A182GSD7	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.591
RP20_CCG010548	RP20_CCG016759	A0A182GIM0	A0A182GVZ5	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	TPR_REGION domain-containing protein.	0.418
RP20_CCG010548	RP20_CCG019274	A0A182GIM0	A0A023EEY5	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Putative cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.570
RP20_CCG010548	RP20_CCG020908	A0A182GIM0	A0A182H3F0	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Cytochrome b5 heme-binding domain-containing protein.	0.646