STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP20_CCG011598Uncharacterized protein. (826 aa)    
Predicted Functional Partners:
RP20_CCG005503
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.889
RP20_CCG010175
TAFII55_N domain-containing protein.
    
 
 0.858
RP20_CCG004569
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.689
RP20_CCG013617
Histone H2A; Belongs to the histone H2A family.
    
 
 0.656
RP20_CCG011599
BRD4_CDT domain-containing protein.
 
      0.614
RP20_CCG004184
Uncharacterized protein.
    
 
 0.609
RP20_CCG003390
C-type lectin domain-containing protein.
    
 
 0.604
RP20_CCG004838
Uncharacterized protein.
    
 
 0.604
RP20_CCG005880
Casein kinase 2a; Belongs to the protein kinase superfamily.
    
 
 0.566
RP20_CCG020201
JmjC domain-containing protein.
    
 
 0.553
Your Current Organism:
Aedes albopictus
NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito
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