Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RP20_CCG002846 | RP20_CCG003755 | A0A023EFR1 | A0A182G625 | Putative cpij005033 nucleolar protein nhp2. | Uncharacterized protein. | 0.745 |
RP20_CCG002846 | RP20_CCG004090 | A0A023EFR1 | A0A182G6L1 | Putative cpij005033 nucleolar protein nhp2. | Nop domain-containing protein. | 0.969 |
RP20_CCG002846 | RP20_CCG005849 | A0A023EFR1 | A0A182G9M8 | Putative cpij005033 nucleolar protein nhp2. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.842 |
RP20_CCG002846 | RP20_CCG012837 | A0A023EFR1 | A0A182GN81 | Putative cpij005033 nucleolar protein nhp2. | PUA domain-containing protein. | 0.999 |
RP20_CCG002846 | RP20_CCG013153 | A0A023EFR1 | A0A182GNW6 | Putative cpij005033 nucleolar protein nhp2. | Brix domain-containing protein. | 0.964 |
RP20_CCG002846 | RP20_CCG016760 | A0A023EFR1 | A0A182GVZ6 | Putative cpij005033 nucleolar protein nhp2. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.842 |
RP20_CCG002846 | RP20_CCG018013 | A0A023EFR1 | A0A182GY78 | Putative cpij005033 nucleolar protein nhp2. | Uncharacterized protein. | 0.969 |
RP20_CCG002846 | RP20_CCG023764 | A0A023EFR1 | A0A182H826 | Putative cpij005033 nucleolar protein nhp2. | FK506-binding protein. | 0.843 |
RP20_CCG002846 | RP20_CCG028554 | A0A023EFR1 | A0A182HFF8 | Putative cpij005033 nucleolar protein nhp2. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.903 |
RP20_CCG003755 | RP20_CCG002846 | A0A182G625 | A0A023EFR1 | Uncharacterized protein. | Putative cpij005033 nucleolar protein nhp2. | 0.745 |
RP20_CCG003755 | RP20_CCG004090 | A0A182G625 | A0A182G6L1 | Uncharacterized protein. | Nop domain-containing protein. | 0.980 |
RP20_CCG003755 | RP20_CCG005849 | A0A182G625 | A0A182G9M8 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.974 |
RP20_CCG003755 | RP20_CCG012837 | A0A182G625 | A0A182GN81 | Uncharacterized protein. | PUA domain-containing protein. | 0.896 |
RP20_CCG003755 | RP20_CCG013153 | A0A182G625 | A0A182GNW6 | Uncharacterized protein. | Brix domain-containing protein. | 0.979 |
RP20_CCG003755 | RP20_CCG016760 | A0A182G625 | A0A182GVZ6 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.974 |
RP20_CCG003755 | RP20_CCG018013 | A0A182G625 | A0A182GY78 | Uncharacterized protein. | Uncharacterized protein. | 0.980 |
RP20_CCG003755 | RP20_CCG023764 | A0A182G625 | A0A182H826 | Uncharacterized protein. | FK506-binding protein. | 0.843 |
RP20_CCG003755 | RP20_CCG028554 | A0A182G625 | A0A182HFF8 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.997 |
RP20_CCG004090 | RP20_CCG002846 | A0A182G6L1 | A0A023EFR1 | Nop domain-containing protein. | Putative cpij005033 nucleolar protein nhp2. | 0.969 |
RP20_CCG004090 | RP20_CCG003755 | A0A182G6L1 | A0A182G625 | Nop domain-containing protein. | Uncharacterized protein. | 0.980 |
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