RP20_CCG026967 protein (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RP20_CCG026967

Uncharacterized protein. (709 aa)

Predicted Functional Partners:

RP20_CCG017127

0.619

RP20_CCG004782

0.605

RP20_CCG013793

0.605

RP20_CCG018955

0.540

RP20_CCG027167

0.523

RP20_CCG014724

0.497

RP20_CCG006757

0.486

RP20_CCG010631

0.485

RP20_CCG004887

0.451

RP20_CCG011135

0.420

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG004782	RP20_CCG004887	A0A182G7S2	A0A182G7Y1	Uncharacterized protein.	Uncharacterized protein.	0.725
RP20_CCG004782	RP20_CCG017127	A0A182G7S2	A0A182GWL1	Uncharacterized protein.	Uncharacterized protein.	0.570
RP20_CCG004782	RP20_CCG018955	A0A182G7S2	A0A182GZY0	Uncharacterized protein.	Uncharacterized protein.	0.741
RP20_CCG004782	RP20_CCG026967	A0A182G7S2	A0A182HD36	Uncharacterized protein.	Uncharacterized protein.	0.605
RP20_CCG004887	RP20_CCG004782	A0A182G7Y1	A0A182G7S2	Uncharacterized protein.	Uncharacterized protein.	0.725
RP20_CCG004887	RP20_CCG013793	A0A182G7Y1	A0A182GQ67	Uncharacterized protein.	Uncharacterized protein.	0.725
RP20_CCG004887	RP20_CCG017127	A0A182G7Y1	A0A182GWL1	Uncharacterized protein.	Uncharacterized protein.	0.570
RP20_CCG004887	RP20_CCG018955	A0A182G7Y1	A0A182GZY0	Uncharacterized protein.	Uncharacterized protein.	0.686
RP20_CCG004887	RP20_CCG026967	A0A182G7Y1	A0A182HD36	Uncharacterized protein.	Uncharacterized protein.	0.451
RP20_CCG006757	RP20_CCG026967	A0A182GB46	A0A182HD36	Uncharacterized protein.	Uncharacterized protein.	0.486
RP20_CCG010631	RP20_CCG017127	A0A182GIT0	A0A182GWL1	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.873
RP20_CCG010631	RP20_CCG026967	A0A182GIT0	A0A182HD36	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.485
RP20_CCG011135	RP20_CCG026967	A0A182GJR0	A0A182HD36	Lysine--tRNA ligase.	Uncharacterized protein.	0.420
RP20_CCG013793	RP20_CCG004887	A0A182GQ67	A0A182G7Y1	Uncharacterized protein.	Uncharacterized protein.	0.725
RP20_CCG013793	RP20_CCG017127	A0A182GQ67	A0A182GWL1	Uncharacterized protein.	Uncharacterized protein.	0.570
RP20_CCG013793	RP20_CCG018955	A0A182GQ67	A0A182GZY0	Uncharacterized protein.	Uncharacterized protein.	0.741
RP20_CCG013793	RP20_CCG026967	A0A182GQ67	A0A182HD36	Uncharacterized protein.	Uncharacterized protein.	0.605
RP20_CCG014724	RP20_CCG026967	A0A182GS01	A0A182HD36	Uncharacterized protein.	Uncharacterized protein.	0.497
RP20_CCG017127	RP20_CCG004782	A0A182GWL1	A0A182G7S2	Uncharacterized protein.	Uncharacterized protein.	0.570
RP20_CCG017127	RP20_CCG004887	A0A182GWL1	A0A182G7Y1	Uncharacterized protein.	Uncharacterized protein.	0.570