STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECL_00415PilM protein. (147 aa)    
Predicted Functional Partners:
ECL_00414
Pilus biogenesis protein PilL.
       0.803
ECL_00416
Type IV pilus formation outer membrane protein.
       0.724
ECL_00413
Hypothetical protein.
       0.572
ECL_00417
Pilin accessory protein PilO.
     
 0.551
ECL_00418
Type IV pilus biogenesis protein PilP.
     
 0.550
ECL_00420
Type IV pilus biogenesis protein PilR.
       0.498
ECL_00423
Hypothetical protein.
       0.497
ECL_00421
Type IV prepilin.
       0.495
ECL_00424
Shufflon protein.
       0.493
ECL_00422
PilT protein.
       0.487
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.