Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ECL_00532Putative integrase; Belongs to the 'phage' integrase family. (321 aa)    
Predicted Functional Partners:
ECL_00531
Hypothetical protein.
 
     0.916
ECL_01839
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
  0.723
ECL_00439
Hypothetical protein.
  
     0.701
ECL_00450
Hypothetical protein.
  
    0.698
ECL_00399
Hypothetical protein.
  
  
 0.694
ECL_00428
Hypothetical protein.
  
     0.681
ECL_00406
Hypothetical protein.
  
     0.665
ECL_00435
Putative inner membrane protein.
  
     0.661
ECL_00409
Hypothetical protein.
  
     0.656
ECL_00452
Hypothetical protein.
  
     0.656
Your Current Organism:
Enterobacter cloacae
NCBI taxonomy Id: 716541
Other names: E. cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae ATCC 13047, Enterobacter cloacae subsp. cloacae str. ATCC 13047, Enterobacter cloacae subsp. cloacae strain ATCC 13047
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